Publications

Publications on Google Scholar and PubMed 

2023

• DK Ko, F Brandizzi. Coexpression Network Construction and Visualization from Transcriptomes Underlying ER Stress Responses. Methods Mol Biol. 2023;2581:385-401.
• SJ Kim, F Brandizzi. Microscopy and Immunocytochemistry-Based Methods to Study Cell Wall Biosynthetic Enzymes in the Golgi. Methods Mol Biol. 2023;2557:39-51. doi: 10.1007/978-1-0716-2639-9_4.

2022

• DK Ko, F Brandizzi. Transcriptional competition shapes proteotoxic ER stress resolution. Nat Plants. 2022 May;8(5):481-490. doi: 10.1038/s41477-022-01150-w. Epub 2022 May 16.
• Y Pu, F Brandizzi. Protein Preparation for Proteomic Analysis of the Unfolded Protein Response in Arabidopsis thaliana. Methods Mol Biol. 2022;2378:279-289. doi: 10.1007/978-1-0716-1732-8_18.
• DK Ko, F Brandizzi. Advanced genomics identifies growth effectors for proteotoxic ER stress recovery in Arabidopsis thaliana. Commun Biol. 2022 Jan 11;5(1):16. doi: 10.1038/s42003-021-02964-8.
• BA McKinley, M Thakran, S Zemelis-Durfee, X Huang, F Brandizzi, WL Rooney, SD Mansfield, JE Mullet. Transcriptional regulation of the raffinose family oligosaccharides pathway in Sorghum bicolor reveals potential roles in leaf sucrose transport and stem sucrose accumulation. Front Plant Sci. 2022 Dec 9;13:1062264. doi: 10.3389/fpls.2022.1062264. eCollection 2022.
• AJ McGinness, J Schoberer, C Pain, F Brandizzi, V Kriechbaumer. On the nature of the plant ER exit sites. Front Plant Sci. 2022 Oct 7;13:1010569. doi: 10.3389/fpls.2022.1010569. eCollection 2022.
• M Fan, JK Jensen, S Zemelis‐Durfee, SJ Kim, JY Chan, CM Beaudry, F Brandizzi, CG Wilkerson. Disruption of Brachypodium lichenase alters metabolism of mixed‐linkage glucan and starch. Plant J. 2022 Feb;109(4):927-939. doi: 10.1111/tpj.15603. Epub 2021 Dec 17.

2021

• E Angelos, F Brandizzi. The UPR Regulator IRE1 Promotes Balanced Organ Development by Restricting TOR‐Dependent Control of Cellular Differentiation in Arabidopsis. The Plant Journal, December 2021
• Mingzhu Fan, Jacob K. Jensen, Starla Zemelis-Durfee, Sang-Jin Kim, Jia-Yi Chan, Claudia M. Beaudry, Federica Brandizzi, Curtis G. Wilkerson Disruption of Brachypodium Lichenase Alters Metabolism of Mixed-linkage Glucan and Starch. The Plant Journal, November 2021, https://doi.org/10.1111/tpj.15603 
• F Brandizzi. Adding to the understanding of grain filling processes through multiomics: high-throughput proteome and metabolome come into play The Plant Journal, August 2021, Volume 107 Issue 3, p. 667-668
• SJ Kim, F Brandizzi. Advances in Cell Wall Matrix Research With a Focus on Mixed Linkage Glucan Plant and Cell Physiology, July 2021
• F Brandizzi. Maintaining the structural and functional homeostasis of the plant endoplasmic reticulum Developmental Cell, April 2021, Volume 56 Issue 7, p. 919-932

2020

• E Angelos, DK Ko, S Zemelis-Durfee, F Brandizzi. Relevance of the Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis. Astrobiology. 2020 Dec 15. Online ahead of print.
• V Kriechbaumer, F Brandizzi. The plant endoplasmic reticulum: an organized chaos of tubules and sheets with multiple functions. J Microsc. 2020 Nov;280(2):122-133.
• J Oliver, M Fan, B McKinley, S Zemelis‐Durfee, F Brandizzi, C Wilkerson, JE Mullet. The AGCVIII kinase Dw2 modulates cell proliferation, endomembrane trafficking, and MLG/xylan cell wall localization in elongating stem internodes of Sorghum bicolor. Plant J. 2020 Nov 19. Online ahead of print.
• GM Burkart, F Brandizzi. A Tour of TOR Complex Signaling in Plants. Trends Biochem Sci. 2020 Dec 9:S0968-0004(20)30275-9.
• AL Preiser, A Banerjee, SE Weise, L Renna, F Brandizzi, TD Sharkey. Phosphoglucoisomerase Is an Important Regulatory Enzyme in Partitioning Carbon out of the Calvin-Benson Cycle. Front. Plant Sci., 10 Dec 2020
• DK Ko, F Brandizzi. A temporal hierarchy underpins the transcription factor‐DNA interactome of the maize UPR. Plant J. 2020 Oct 24. Online ahead of print.
• DD Bhandari, F Brandizzi. Plant endomembranes and cytoskeleton: moving targets in immunity. Curr Opin Plant Biol. 2020 Oct 21;58:8-16. Online ahead of print.
• SJ Kim, B Chandrasekar, AC Rea, L Danhof, S Zemelis-Durfee, N Thrower, ZS Shepard, M Pauly, F Brandizzi, K Keegstra. The synthesis of xyloglucan, an abundant plant cell wall polysaccharide, requires CSLC function. Proc Natl Acad Sci U S A. 2020 Jul 31:202007245
• DK Ko, F Brandizzi. Network-based approaches for understanding gene regulation and function in plants. Plant J. 2020 Jul 27. Online ahead of print.
• F Brandizzi. The Plant Endoplasmic Reticulum: A Dynamic Network of Interconnected Membranes. Microsc. Microanal. 26(S2), 136-136. 
• F Brandizzi. To grow or not to grow …. Plant J. 2020 Jul;103(2):479-480.
• P Fan, P Wang, YR Lou, BJ Leong, BM Moore, CA Schenck, R Combs, P Cao, Brandizzi F, Shiu SH, Last RL. Evolution of a plant gene cluster in Solanaceae and emergence of metabolic diversity. Elife. 2020 Jul 2;9:e56717
• L Renna, F Brandizzi The mysterious life of the plant trans‐Golgi Network: advances and tools to understand it better. J Microsc. 2020 01 March 2020
• A Zienkiewicz, K Zienkiewicz, E Poliner, JA Pulman, ZY Du, G Stefano, CH Tsai, PJ Horn, I Feussner, EM Farre, K Childs, F Brandizzi, C Benning The Microalga Nannochloropsis during transition from quiescence to autotrophy in response to nitrogen availability. Plant Physiol. 2020 Feb;182(2):819-839.
• N Pastor-Cantizano, DK Ko, E Angelos, Y Pu, F Brandizzi Functional Diversification of ER Stress Responses in Arabidopsis. Trends Biochem Sci. 2020 Feb;45(2):123-136.
• G Stefano, F Brandizzi. Analysis of Endoplasmic Reticulum–Endosome Association Using Live-Cell Imaging in Plant Cells. Methods Mol Biol. 2020;2177:23-33.

2019

• P Cao, SJ Kim, A Xing, CA Schenck, L Liu, N Jiang, J Wang, RL Last, F Brandizzi Homeostasis of branched-chain amino acids is critical for the activity of TOR signaling in Arabidopsis. Elife. 2019 Dec 6;8. pii: e50747 [Epub ahead of print]
• *Y Pu, *C Ruberti, ER Angelos, F Brandizzi AtIRE1C, an unconventional isoform of the UPR master regulator AtIRE1, is functionally associated with AtIRE1B in Arabidopsis gametogenesis. Plant Direct. 2019 Nov 28 [Epub ahead of print]. *Equally contributed
• EM Neill, MCR Byrd, T Billman, F Brandizzi, AE Stapleton Plant growth regulators interact with elevated temperature to alter heat stress signaling via the Unfolded Protein Response in maize. Sci Rep. 2019 Jul 17;9(1):10392. 
• F Brandizzi Divide, expand, differentiate–new insights on plant organ growth through cytokinin signaling. Plant J. 2019 Mar;97(5):803-804.
• F Barozzi, P Papadia, G Stefano, L Renna, F Brandizzi, D Migoni, FP Fanizzi, G Piro, GP Di Sansebastiano. Variation in Membrane Trafficking Linked to SNARE AtSYP51 Interaction With Aquaporin NIP1;1. Front Plant Sci. 2019 Jan 9;9:1949. doi: 10.3389/fpls.2018.01949. eCollection 2018.

2018

• L Renna, G Stefano, E Slabaugh, C Wormsbaecher, A Sulpizio, K Zienkiewicz, F Brandizzi TGNap1 is required for microtubule-dependent homeostasis of a subpopulation of the plant trans-Golgi network. Nat Commun. 2018 Dec 14;9(1):5313.
• L Sweetlove, F Brandizzi The Plant Journal has introduced optional double‐blind peer review. Plant J. 2018 Oct;96(2):247-248.
• YS Lai, G Stefano, S Zemelis-Durfee, C Ruberti, L Gibbons, F Brandizzi Systemic signaling contributes to the unfolded protein response of the plant endoplasmic reticulum. Nat Commun. 2018 Sep 25;9:3918. 
• M Fan, K Herburger, JK Jensen, S Zemelis-Durfee, F Brandizzi, SC Fry, CG Wilkerson A Trihelix Family Transcription Factor is Associated with Key Genes in Mixed-linkage Glucan Accumulation. Plant Physiol. 2018 Sep 17. pii: pp.00978.2018. 
• E Angelos and F Brandizzi NADPH Oxidase activity is required for ER stress survival in plants. Plant J. 2018 Sep 15. [Epub ahead of print]
• F Brandizzi Rabs: targets in the plant‐pathogen battlefield. Plant J. 2018 Jul;95(2):185-186.
• YS Lai, L Renna, J Yarema, C Ruberti, SY He, F Brandizzi Salicylic acid-independent role of NPR1 is required for protection from proteotoxic stress in the plant endoplasmic reticulum. Proc Natl Acad Sci U S A. 2018 May 29;115(22):E5203-E5212.
• G Stefano, L Renna, C Wormsbaecher, J Gamble, K Zienkiewicz, F Brandizzi Plant Endocytosis Requires the ER Membrane-Anchored Proteins VAP27-1 and VAP27-3. Cell Rep. 2018 May 22;23(8):2299-2307.
• SJ Kim, S Zemelis‐Durfee, JK Jensen, CG Wilkerson, K Keegstra, F Brandizzi In the grass species Brachypodium distachyon, the production of mixed‐linkage (1,3;1,4)‐β‐glucan (MLG) occurs in the Golgi apparatus. Plant J. 2018 Mar;93(6):1062-1075.
• G Stefano, L Renna, F Brandizzi Plant Cell Vacuoles: Staining and Fluorescent Probes. Methods Mol Biol. 2018;1789:55-63.
• L Renna, G Stefano, F Brandizzi Live Cell Imaging and Confocal Microscopy. Methods Mol Biol. 2018;1789:117-130.
• R Srivastava, Z Li, G Russo, J Tang, R Bi, U Muppirala, S Chudalayandi, A Severin, M He, SI Vaitkevicius, CJ Lawrence-Dill, P Liu, AE Stapleton, DC Bassham, F Brandizzi, SH Howell Response to Persistent ER Stress in Plants: a Multiphasic Process that Transitions Cells from Prosurvival Activities to Cell Death. Plant Cell. 2018 Jun;30(6):1220-1242.
• C Ruberti, YS Lai, F Brandizzi Recovery from temporary endoplasmic reticulum stress in plants relies on the tissue-specific and largely independent roles of bZIP28 and bZIP60, as well as an antagonizing function of BAX-Inhibitor 1 upon the pro-adaptive signaling mediated by bZIP28. Plant J. 2018 Jan;93(1):155-165.
• C Ruberti, F Brandizzi Unfolded Protein Response in Arabidopsis. Methods Mol Biol. 2018;1691:231-238.
• G Stefano, F Brandizzi Advances in plant ER architecture and dynamics. Plant Physiol. 2018 Jan;176(1):178-186.

2017

• F Brandizzi Transport from the endoplasmic reticulum to the Golgi in plants: Where are we now? Semin Cell Dev Biol. 2018 Aug;80:94-105.
• SJ Kim, S Zemelis-Durfee, C Wilkerson, F Brandizzi In Brachypodium a complex signaling is actuated to protect cells from proteotoxic stress and facilitate seed filling. Planta. 2017 Jul;246(1):75-89.
• E Angelos, C Ruberti, SJ Kim, F Brandizzi Maintaining the factory: the roles of the unfolded protein response in cellular homeostasis in plants. Plant J. 2017 May;90(4):671-682.
• Z Meng, C Ruberti, Z Gong, F Brandizzi CPR 5 modulates salicylic acid and the unfolded protein response to manage tradeoffs between plant growth and stress responses. Plant J. 2017 Feb;89(3):486-501.
• YS Kim, C An, S Park, SJ Gilmour, L Wang, L Renna, F Brandizzi, R Grumet, M Thomashow CAMTA-mediated regulation of salicylic acid immunity pathway genes in Arabidopsis exposed to low temperature and pathogen infection. Plant Cell. 2017 Oct;29(10):2465-2477.

2016

• P Cao, L Renna, G Stefano, F Brandizzi SYP73 Anchors the ER to the Actin Cytoskeleton for Maintenance of ER Integrity and Streaming in Arabidopsis. Curr Biol. 2016 Dec 5;26(23):3245-3254
• SJ Kim, F Brandizzi The plant secretory pathway for the trafficking of cell wall polysaccharides and glycoproteins. Glycobiology. 2016 Sep;26(9):940-949.
• JH Kang, ML Campos, S Zemelis-Durfee, JM Al-Haddad, AD Jones, FW Telewski, F Brandizzi, GA Howe Molecular cloning of the tomato Hairless gene implicates actin dynamics in trichome-mediated defense and mechanical properties of stem tissue. J Exp Bot. 2016 Oct;67(18):5313-5324.
• RM Larkin, G Stefano, ME Ruckle, AK Stavoe, CA Sinkler, F Brandizzi, CM Malmstrom, KW Osteryoung REDUCED CHLOROPLAST COVERAGE genes from Arabidopsis thaliana help to establish the size of the chloroplast compartment. Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1116-25.
• SM Weraduwage, SJ Kim, L Renna, FC Anozie, TD Sharkey, F Brandizzi Pectin Methylesterification Impacts the Relationship Between Photosynthesis and Plant Growth in Arabidopsis thaliana. Plant Physiol. 2016 Jun;171(2):833-48.
• JA Sparks, T Kwon, L Renna, F Liao, F Brandizzi, EB Blancaflor HLB1 is a novel tetratricopeptide repeat domain-containing protein that operates at the intersection of the exocytic and endocytic pathways at the TGN/EE in Arabidopsis. Plant Cell. 2016 Mar;28(3):746-69.

2015

• G Stefano, L Renna, YS Lai, E Slabaugh, N Mannino, RA Buono, MS Otegui, F Brandizzi ER network homeostasis is critical for plant endosome streaming and endocytosis. Cell Discov. 2015 Nov 17;1:15033.
• C Ruberti, SJ Kim, G Stefano, F Brandizzi Unfolded protein response in plants: one master, many questions. Curr Opin Plant Biol. 2015 Oct;27:59-66.
• DG Robinson, F Brandizzi, C Hawes, A Nakano Vesicles versus tubes: is endoplasmic reticulum-Golgi transport in plants fundamentally different from other eukaryotes? Plant Physiol. 2015 Jun;168(2):393-406.
• L Zhang, H Chen, F Brandizzi, J Verchot, A Wang The UPR branch IRE1-bZIP60 in plants plays an essential role in viral infection and is complementary to the only UPR pathway in yeast. PLoS Genet. 2015 Apr 15;11(4):e1005164.
• SJ Kim, MA Held, S Zemelis, C Wilkerson, F Brandizzi CGR2 and CGR3 have critical overlapping roles in pectin methylesterification and plant growth in Arabidopsis thaliana. Plant J. 2015 Apr;82(2):208-20.
• SJ Kim, S Zemelis, K Keegstra, F Brandizzi The cytoplasmic localization of the catalytic site of CSLF 6 supports a channeling model for the biosynthesis of mixed‐linkage glucan. Plant J. 2015 Feb;81(4):537-47.
• G Stefano, L Renna, F Brandizzi BiFC for protein–protein interactions and protein topology: discussing an integrative approach for an old technique. Methods Mol Biol. 2015;1242:173-82.
• H Ueda, E Yokota, K Kuwata, N Kutsuna, S Mano, T Shimada, K Tamura, G Stefano, Y Fukao, F Brandizzi, T Shimmen, M Nishimura, I Hara-Nishimura Phosphorylation of the C-terminus of RHD3 has a critical role in homotypic ER membrane fusion in Arabidopsis. Plant Physiol. 2016 Feb;170(2):867-80.
• Y Kong, MJ Peña, L Renna, U Avic, S Pattathil, ST Tuomivaara, X Li, WD Reiter, F Brandizzi, MG Hahn, AG Darvill, WS York, M O'Neill Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis. Plant Physiol. 2015 Apr;167(4):1296-306.

2014

• G Stefano, C Hawes, F Brandizzi ER–the key to the highway. Curr Opin Plant Biol. 2014 Dec;22:30-38.
• D Barajas, K Xu, IF de Castro Martín, Z Sasvari, F Brandizzi, C Risco, PD Nagy Co-opted oxysterol-binding ORP and VAP proteins channel sterols to RNA virus replication sites via membrane contact sites. PLoS Pathog. 2014 Oct 16;10(10):e1004388.
• AJ Koo, C Thireault, S Zemelis, AN Poudel, T Zhang, N Kitaoka, F Brandizzi, H Matsuura, GA Howe Endoplasmic reticulum-associated inactivation of the hormone jasmonoyl-L-isoleucine by multiple members of the cytochrome P450 94 family in Arabidopsis. J Biol Chem. 2014 Oct 24;289(43):29728-38.
• L Maneta-Peyret, YS Lai, G Stefano, L Fouillen, F Brandizzi, P Moreau Phospholipid biosynthesis increases in RHD3-defective mutants. Plant Signal Behav. 2014 Jul 14;9.
• F Brandizzi, L Frigerio, SH Howell, P Schäfer Endoplasmic reticulum—shape and function in stress translation. Front Plant Sci. 2014 Sep 1;5:425.
• YS Lai, G Stefano, F Brandizzi ER stress signaling requires RHD3, a functionally conserved ER-shaping GTPase. J Cell Sci. 2014 Aug 1;127(Pt 15):3227-32.
• F Brandizzi, C Barlowe ER-Golgi transport: authors' response. Nat Rev Mol Cell Biol. 2014 Mar;15(3):1. 
• C Ruberti, F Brandizzi Conserved and plant-unique strategies for overcoming endoplasmic reticulum stress. Front Plant Sci. 2014 Feb 26;5:69.
• SJ Kim, F Brandizzi The plant secretory pathway: an essential factory for building the plant cell wall. Plant Cell Physiol. 2014 Apr;55(4):687-93.
• T Savchenko, VA Kolla, CQ Wang, Z Nasai, DR Hicks, B Phadungchob, WE Chehab, F Brandizzi, J Froehlich, K Dehesh Functional convergence of oxylipin and abscisic acid pathways controls stomatal closure in response to drought. Plant Physiol. 2014 Mar;164(3):1151-60.
• G Stefano, L Renna, F Brandizzi The endoplasmic reticulum exerts control over organelle streaming during cell expansion. Cell Sci. 2014 Mar 1;127(Pt 5):947-53.
• T Savchenko, V Kolla, CQ Wang, Z Nasafi, D Hicks, B Phadungchob, W Chehab, F Brandizzi, J Froehlich, K Dehesh Functional convergence of oxylipin and ABA pathways controls stomatal closure in response to drought. Plant Physiol. 2014 Mar;164(3):1151-60.
• G Stefano, F Brandizzi Unique and conserved features of the plant ER-shaping GTPase RHD3 Cell Logist. 2014 Jan 1;4(1):e28217.
• J Rodriguez-López, C Martínez-Centeno, A Padmanaban, G Guillén, JE Olivares, G Stefano, F Lledías, F Ramos, SA Ghabrial, F Brandizzi, M Rocha-Sosa, C Díaz-Camino, F Sanchez Nodulin 22, a novel small heat-shock protein of the endoplasmic reticulum, is linked to the unfolded protein response in common bean Mol Plant Microbe Interact. 2014 Jan;27(1):18-29.
• Y Chen, K Aung, J Rolčík, K Walicki, J Friml, F Brandizzi Inter‐regulation of the unfolded protein response and auxin signaling Plant J. 2014 Jan;77(1):97-107.

2013

• J Takagi, L Renna, H Takahashi, Y Koumoto, K Tamura, G Stefano, Y Fukao, M Kondo, M Nishimura, T Shimada, F Brandizzi, I Hara-Nishimura MAIGO5 functions in protein export from Golgi-associated endoplasmic reticulum exit sites in Arabidopsis Plant Cell. 2013 Nov;25(11):4658-75.
• Y Chen, F Brandizzi IRE1: ER stress sensor and cell fate executor Trends Cell Biol. 2013 Nov;23(11):547-55.
• JA McNew, H Sondermann, T Lee, M Stern, F Brandizzi GTP-dependent membrane fusion Annu Rev Cell Dev Biol. 2013;29:529-50.
• P Mehrshahi, G Stefano, JM Andaloro, F Brandizzi, JE Froehlich, D DellaPenna Transorganellar complementation redefines the biochemical continuity of endoplasmic reticulum and chloroplasts Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):12126-31.
• F Brandizzi, GO Wasteneys Cytoskeleton‐dependent endomembrane organization in plant cells: an emerging role for microtubules Plant J. 2013 Jul;75(2):339-49.
• GO Wasteneys, F Brandizzi A Glorious Half‐Century of Microtubules Plant J. 2013 Jul;75(2):185-8.
• F Brandizzi, C Barlowe Organization of the ER–Golgi interface for membrane traffic control Nat Rev Mol Cell Biol. 2013 Jun;14(6):382-92.
• W Du, K Tamura, G Stefano, F Brandizzi The integrity of the plant Golgi apparatus depends on cell growth-controlled activity of GNL1 Mol Plant. 2013 May;6(3):905-15.
• L Renna, G Stefano, W Majeran, C Micalella, T Meinnel, C Giglione, F Brandizzi Golgi traffic and integrity depend on N-myristoyl transferase-1 in Arabidopsis Plant Cell. 2013 May;25(5):1756-73.
• GD Moghe, MD Lehti-Shiu, AE Seddon, S Yin, Y Chen, P Juntawong, F Brandizzi, J Bailey-Serres, S Shiu Characteristics and Signiicance of Intergenic Polyadenylated RNA Transcription in Arabidopsis Plant Physiol. 2013 Jan;161(1):210-24.
• G Stefano, A Osterrieder, C Hawes, F Brandizzi Endomembrane and Golgi traffic in plant cells Methods Cell Biol. 2013;118:69-83.
• JD Matakas, V Balan, GD Carson IV, F Brandizzi Plant-produced recombinant human interleukin-2 and its activity against splenic CD4+ T-cells Int. J. LifeSc. Bt & Pharm. Res. 2013;2;193-203.
• Y Chen, F Brandizzi Analysis of unfolded protein response in Arabidopsis Methods Mol Biol. 2013;1043:73-80.

2012

• YJ Tan, WH Wang, Y Zheng, J Dong, G Stefano, F Brandizzi, RM Garavito, GE Reid, ML Bruening Limited proteolysis via millisecond digestions in protease-modified membranes Anal Chem. 2012 Oct 2;84(19):8357-63.
• E Ruiz-May, SJ Kim, F Brandizzi, JKC Rose The secreted plant N-glycoproteome and associated secretory pathways Front Plant Sci. 2012 Jun 6;3:117.
• R Srivastava, Y Chen, Y Deng, F Brandizzi, SH Howell Elements proximal to and within the transmembrane domain mediate the organelle‐to‐organelle movement of bZIP28 under ER stress conditions Plant J. 2012 Jun;70(6):1033-42.
• A Aharoni, F Brandizzi High‐Resolution Measurements in Plant Biology Plant J. 2012 Apr;70(1):1-4.
• I Sparkes, F Brandizzi Fluorescent protein‐based technologies: shedding new light on the plant endomembrane system Plant J. 2012 Apr;70(1):96-107.
• G Stefano, L Renna, T Moss, JA McNew, F Brandizzi In Arabidopsis, the spatial and dynamic organization of the endoplasmic reticulum and Golgi apparatus is influenced by the integrity of the C-terminal domain of RHD3, a non-essential GTPase Plant J. 2012 Mar;69(6):957-66.
• AA Moreno, MS Mukhtar, F Blanco, JL Boatwright, I Moreno, MR Jordan, Y Chen, F Brandizzi, X Dong, A Orellana, KM Pajerowska-Mukhtar IRE1/bZIP60-mediated unfolded protein response plays distinct roles in plant immunity and abiotic stress responses PLoS One. 2012;7(2):e31944.
• SJ Kim, F Brandizzi News and views into the SNARE complexity in Arabidopsis Front Plant Sci. 2012 Feb 10;3:28
• FKH Breuers, A Bräutigam, S Geimer, UY Welzel, G Stefano, L Renna, F Brandizzi, APM Weber Dynamic remodeling of the plastid envelope membranes–a tool for chloroplast envelope in vivo localizations Front Plant Sci. 2012 Jan 23;3:7.
• Q Ma, W Du, F Brandizzi, JJ Giovannoni, CS Barry Differential control of ethylene responses by GREEN-RIPE and GREEN-RIPE LIKE1 provides evidence for distinct ethylene signaling modules in tomato Plant Physiol. 2012 Dec;160(4):1968-84.
• Y Chen, F Brandizzi AtIRE1A/AtIRE1B and AGB1 independently control two essential unfolded protein response pathways in Arabidopsis Plant J. 2012 Jan;69(2):266-77.
• G Stefano, L Renna, F Brandizzi Fluorescence-microscopy screening and next-generation sequencing: useful tools for the identification of genes involved in organelle integrity J Vis Exp. 2012 Apr 13;(62).

2011

• MA Held, E Be, S Zemelis, S Withers, C Wilkerson, F Brandizzi CGR3: a Golgi-localized protein influencing homogalacturonan methylesterification Mol Plant. 2011 Sep;4(5):832-44.
• E Slabaugh, F Brandizzi Membrane-tethered transcription factors provide a connection between stress response and developmental pathways Plant Signal Behav. 2011 Aug;6(8):1210-1.
• E Slabaugh, M Held, F Brandizzi Control of root hair development in Arabidopsis thaliana by an endoplasmic reticulum anchored member of the R2R3‐MYB transcription factor family Plant J. 2011 Aug;67(3):395-405.
• R Conger, Y Chen, S Fornaciari, C Faso, MA Held, L Renna, F Brandizzi Evidence for the involvement of the Arabidopsis SEC24A in male transmission J Exp Bot. 2011 Oct;62(14):4917-26. 
• M Tian, J Win, E Savory, A Burkhardt, M Held, F Brandizzi, B Day 454 Genome Sequencing of Pseudoperonospora cubensis Reveals Effector Proteins with a QXLR Translocation Motif Mol Plant Microbe Interact. 2011 May;24(5):543-53. 
• F Brandizzi, R Mullen Organelle biogenesis and communication in plant cells Plant Cell Rep. 2011 Feb;30(2):135-6.
• F Brandizzi Is There a COPII‐Mediated Membrane Traffic in Chloroplasts? Traffic. 2011 Jan;12(1):9-11.
• J Chen, G Stefano, F Brandizzi, H Zheng Arabidopsis RHD3 mediates the generation of the tubular ER network and is required for Golgi distribution and motility in plant cells J Cell Sci. 2011 Jul 1;124(Pt 13):2241-52.

2010

• G Stefano, L Renna, M Rossi, E Azzarello, S Pollastri, F Brandizzi, F Baluska, S Mancuso AGD5 is a GTPase‐activating protein at the trans‐Golgi network Plant J. 2010 Dec;64(5):790-9.
• J Davis, F Brandizzi, AH Liepman, K Keegstra Arabidopsis mannan synthase CSLA9 and glucan synthase CSLC4 have opposite orientations in the Golgi membrane Plant J. 2010 Dec;64(6):1028-37. 
• L Marti, G Stefano, K Tamura, C Hawes, L Renna, MA Held, F Brandizzi A missense mutation in the vacuolar protein GOLD36 causes organizational defects in the ER and aberrant protein trafficking in the plant secretory pathway Plant J. 2010 Sep;63(6):901-13.
• L Marti, S Fornaciari, L Renna, G Stefano, F Brandizzi COPII-mediated traffic in plants Trends Plant Sci. 2010 Sep;15(9):522-8.
• F Reyes, G León, M Donoso, F Brandizzí, APM Weber, A Orellana The nucleotide sugar transporters AtUTr1 and AtUTr3 are required for the incorporation of UDP-glucose into the endoplasmic reticulum, are essential for pollen development and are needed for embryo sac progress in Arabidopsis thaliana Plant J. 2010 Feb 1;61(3):423-35. 

2009

• C Faso, A Boulaflous, F Brandizzi The plant Golgi apparatus: last 10 years of answered and open questions FEBS Lett. 2009 Dec 3;583(23):3752-7. 
• C Faso, YN Chen, K Tamura, M Held, S Zemelis, L Marti, RS Saravanan, E Hummel, L Kung, E Miller, C Hawes, F Brandizzi A missense mutation in the Arabidopsis COPII coat protein Sec24A induces the formation of clusters of the endoplasmic reticulum and Golgi apparatus Plant Cell. 2009 Nov;21(11):3655-71.
• S Melser, V Wattelet-Boyer, F Brandizzi, P Moreau Blocking ER export of the Golgi SNARE SYP31 affects plant growth Plant Signal Behav. 2009 Oct;4(10):962-4.
• L Chatre, V Wattelet-Boyer, S Melser, L Maneta-Peyret, F Brandizzi, P Moreau A novel di-acidic motif facilitates ER export of the syntaxin SYP31 J Exp Bot. 2009;60(11):3157-65.
• RS Saravanan, E Slabaugh, VR Singh, LJ Lapidus, T Haas, F Brandizzi The targeting of the oxysterol‐binding protein ORP3a to the endoplasmic reticulum relies on the plant VAP33 homolog PVA12 Plant J. 2009 Jun;58(5):817-30.
• SL Hanton, LA Matheson, L Chatre, F Brandizzi Dynamic organization of COPII coat proteins at endoplasmic reticulum export sites in plant cells Plant J. 2009 Mar;57(6):963-74.
• T Brach, S Soyk, C Müller, G Hinz, R Hell, F Brandizzi, AJ Meyer Non‐invasive topology analysis of membrane proteins in the secretory pathway Plant J. 2009 Feb;57(3):534-41.
• L Chatre, LA Matheson, AS Jack, SL Hanton, F Brandizzi Efficient mitochondrial targeting relies on co-operation of multiple protein signals in plants J Exp Bot. 2009;60(3):741-9. 

2008

• C Sieben, M Mikosch, F Brandizzi, U Homann Interaction of the K⁺‐channel KAT1 with the coat protein complex II coat component Sec24 depends on a di‐acidic endoplasmic reticulum export motif Plant J. 2008 Dec;56(6):997-1006. 
• YN Chen, E Slabaugh, F Brandizzi Membrane-tethered transcription factors in Arabidopsis thaliana: novel regulators in stress response and development Curr Opin Plant Biol. 2008 Dec;11(6):695-701.
• D Ehrhardt, F Brandizzi Cell biology. Editorial overview Curr Opin Plant Biol. 2008 Dec;11(6):575-6.
• H Gao, F Brandizzi, C Benning, RM Larkin A membrane-tethered transcription factor defines a branch of the heat stress response in Arabidopsis thaliana Proc Natl Acad Sci U S A. 2008 Oct 21;105(42):16398-403.
• A Boulaflous, C Faso, F Brandizzi Deciphering the Golgi apparatus: from imaging to genes Traffic. 2008 Sep;9(10):1613-7.
• MA Held, A Boulaflous, F Brandizzi Advances in fluorescent protein-based imaging for the analysis of plant endomembranes Plant Physiol. 2008 Aug;147(4):1469-81.
• SL Hanton, L Chatre, LA Matheson, M Rossi, MA Held, F Brandizzi Plant Sar1 isoforms with near-identical protein sequences exhibit different localisations and effects on secretion Plant Mol Biol. 2008 Jun;67(3):283-94.
• LA Matheson, SS Suri, SL Hanton, L Chatre, F Brandizzi Correct targeting of plant ARF GTPases relies on distinct protein domains Traffic. 2008 Jan;9(1):103-20.
• DC Bassham, F Brandizzi, MS Otegui, AA Sanderfoot The secretory system of Arabidopsis Arabidopsis Book. 2008;6:e0116.
• F Brandizzi Protein export from the plant endoplasmic reticulum to the Golgi apparatus Comparative Biochemistry and Physiology, Part A 3 (150), S200-S201
• L Chatre, V WatteletBoyer, S Melser, P Moreau, F Brandizzi Golgi targeting of SYP31: Requirement of a di-acidic motif Comparative Biochemistry and Physiology, Part A 3 (150), S201

2007

• SL Hanton, LA Matheson, L Chatre, M Rossi, F Brandizzi Post-Golgi protein traffic in the plant secretory pathway Plant Cell Rep. 2007 Sep;26(9):1431-8.
• E Fouquaert, SL Hanton, F Brandizzi, WJ Peumans, EJM Van Damme Localization and topogenesis studies of cytoplasmic and vacuolar homologs of the Galanthus nivalis agglutinin Plant Cell Physiol. 2007 Jul;48(7):1010-21.
• LA Matheson, SL Hanton, M Rossi, M Latijnhouwers, G Stefano, L Renna, F Brandizzi Multiple roles of ADP-ribosylation factor 1 in plant cells include spatially regulated recruitment of coatomer and elements of the Golgi matrix Plant Physiol. 2007 Apr;143(4):1615-27.
• SL Hanton, L Chatre, L Renna, LA Matheson, F Brandizzi De novo formation of plant endoplasmic reticulum export sites is membrane cargo induced and signal mediated Plant Physiol. 2007 Apr;143(4):1640-50.
• SL Hanton, LA Matheson, L Chatre, F Brandizzi The Golgi Apparatus–A Key Organelle in the Plant Secretory Pathway Functional Plant Science and Biotechnology 1 (1), 69-76
• SL Hanton, LA Matheson, F Brandizzi Studying protein export from the endoplasmic reticulum in plants Methods Mol Biol. 2007;390:297-308.

2006

• LA Matheson, SL Hanton, F Brandizzi Traffic between the plant endoplasmic reticulum and Golgi apparatus: to the Golgi and beyond Curr Opin Plant Biol. 2006 Dec;9(6):601-9.
• P Moreau, F Brandizzi, S Hanton, L Chatre, S Melser, C Hawes, B Satiat-Jeunemaitre The plant ER–Golgi interface: a highly structured and dynamic membrane complex J Exp Bot. 2007;58(1):49-64.
• Y Zhou, H Niu, F Brandizzi, LC Fowke, H Wang Molecular control of nuclear and subnuclear targeting of the plant CDK inhibitor ICK1 and ICK1-mediated nuclear transport of CDKA Plant Mol Biol. 2006 Sep;62(1-2):261-78.
• SL Hanton, LA Matheson, F Brandizzi Seeking a way out: export of proteins from the plant endoplasmic reticulum Trends Plant Sci. 2006 Jul;11(7):335-43.
• G Stefano, L Renna, SL Hanton, L Chatre, TA Haas, F Brandizzi ARL1 plays a role in the binding of the GRIP domain of a peripheral matrix protein to the Golgi apparatus in plant cells Plant Mol Biol. 2006 Jun;61(3):431-49.
• TPJ Dunkley, S Hester, IP Shadforth, J Runions, T Weimar, SL Hanton, JL Griffin, C Bessant, F Brandizzi, C Hawes, RB Watson, P Dupree, KS Lilley Mapping the Arabidopsis organelle proteome Proc Natl Acad Sci U S A. 2006 Apr 25;103(17):6518-23.
• SL Hanton, F Brandizzi Protein transport in the plant secretory pathway Canadian Journal of Botany, 2006, 84(4): 523-530.
• G Stefano, L Renna, L Chatre, SL Hanton, P Moreau, C Hawes, F Brandizzi In tobacco leaf epidermal cells, the integrity of protein export from the endoplasmic reticulum and of ER export sites depends on active COPI machinery Plant J. 2006 Apr;46(1):95-110.
• SL Hanton, F Brandizzi Fluorescent proteins as markers in the plant secretory pathway Microsc Res Tech. 2006 Mar;69(3):152-9.

2005

• F Brandizzi, S Hanton, L Renna, L Bortolotti, G Stefano Dynamics of the endoplasmic reticulum and Golgi apparatus in live plant cells Biochemistry and Cell Biology. Vol. 83, Iss. 6: 781.
• L Chatre, F Brandizzi, A Hocquellet, C Hawes, P Moreau Sec22 and Memb11 are v-SNAREs of the anterograde endoplasmic reticulum-Golgi pathway in tobacco leaf epidermal cells Plant Physiol. 2005 Nov;139(3):1244-54.
• SL Hanton, L Renna, LE Bortolotti, L Chatre, G Stefano, F Brandizzi Diacidic motifs influence the export of transmembrane proteins from the endoplasmic reticulum in plant cells Plant Cell. 2005 Nov;17(11):3081-93.
• S Rutherford, F Brandizzi, H Townley, J Craft, Y Wang, I Jepson, A Martinez, I Moore Improved transcriptional activators and their use in mis‐expression traps in Arabidopsis Plant J. 2005 Sep;43(5):769-88.
• L Renna, SL Hanton, G Stefano, L Bortolotti, V Misra, F Brandizzi Identification and characterization of AtCASP, a plant transmembrane Golgi matrix protein Plant Mol Biol. 2005 May;58(1):109-22.
• SL Hanton, LE Bortolotti, L Renna, G Stefano, F Brandizzi Crossing the divide–transport between the endoplasmic reticulum and Golgi apparatus in plants Traffic. 2005 Apr;6(4):267-77.
• LP Luis, JP Taylor, JL Hadlington, SL Hanton, CJ Snowden, SJ Fox, O Foresti, F Brandizzi, J Denecke Receptor salvage from the prevacuolar compartment is essential for efficient vacuolar protein targeting Plant Cell. 2005 Jan;17(1):132-48.
• MH Noyan-Ashraf, F Brandizzi, BH Juurlink. Constitutive nuclear localization of activated caspase 3 in subpopulations of the astroglial family of cells Glia. 2005 Mar;49(4):588-93.

2004

• AM Kotzer, F Brandizzi, U Neumann, N Paris, I Moore, C Hawes AtRabF2b (Ara7) acts on the vacuolar trafficking pathway in tobacco leaf epidermal cells J Cell Sci. 2004 Dec 15;117(Pt 26):6377-89.
• MG Handford, F Sicilia, F Brandizzi, JH Chung, P Dupree Arabidopsis thaliana expresses multiple Golgi-localised nucleotide-sugar transporters related to GONST1 Mol Genet Genomics. 2004 Nov;272(4):397-410.
• F Brandizzi, SL Irons, DE Evans The plant nuclear envelope: new prospects for a poorly understood structure New Phytol. 163(2):227-246. 
• LP Luis, EL Snapp, J Denecke, J Lippincott-Schwartz, C Hawes, F Brandizzi Endoplasmic reticulum export sites and Golgi bodies behave as single mobile secretory units in plant cells Plant Cell. 2004 Jul;16(7):1753-71.
• F Brandizzi, SL Irons, J Johansen, A Kotzer, U Neumann GFP is the way to glow: bioimaging of the plant endomembrane system J Microsc. 2004 May;214(Pt 2):138-58.
• F Brandizzi, C Hawes A long and winding road: symposium on membrane trafficking in plants EMBO Rep. 2004 Mar;5(3):245-9. 
• C Hawes, F Brandizzi The Golgi apparatus–still causing problems after all these years! Cell Mol Life Sci. 2004 Jan;61(2):131-2.
• TH Ward, F Brandizzi Dynamics of proteins in Golgi membranes: comparisons between mammalian and plant cells highlighted by photobleaching techniques Cell Mol Life Sci. 2004 Jan;61(2):172-85.
• DE Evans, SL Irons, MH Debela, F Brandizzi The nuclear envelope in the plant cell cycle Nuclear Envelope. 2004 56:244.

2003

• IA Sparkes, F Brandizzi, SP Slocombe, M El-Shami, C Hawes, A Baker An Arabidopsis pex10 null mutant is embryo lethal, implicating peroxisomes in an essential role during plant embryogenesis Plant Physiol. 2003 Dec;133(4):1809-19.
• Y Zhou, G Li, F Brandizzi, LC Fowke, H Wang The plant cyclin‐dependent kinase inhibitor ICK1 has distinct functional domains for in vivo kinase inhibition, protein instability and nuclear localization Plant J. 2003 Aug;35(4):476-89.
• U Neumann, F Brandizzi, C Hawes Protein Transport in Plant Cells: In and Out of the Golgi Ann Bot. 2003 Aug;92(2):167-80.
• F Brandizzi, S Irons, A Kearns, C Hawes BY‐2 cells: culture and transformation for live cell imaging Curr Protoc Cell Biol. 2003 Jun;19(1):1.7. 1-1.7. 16.
• F Brandizzi, S Hanton, LLP DaSilva, P Boevink, D Evans, K Oparka, J Denecke, C Hawes ER quality control can lead to retrograde transport from the ER lumen to the cytosol and the nucleoplasm in plants Plant J. 2003 May;34(3):269-81.
• F Brandizzi Green Fluorescent Protein–Applications and Protocols J Microsc. 2003 May;210(2):188.
• F Brandizzi, C Saint‐Jore, I Moore, C Hawes The relationship between endomembranes and the plant cytoskeleton Cell Biol Int. 2003;27(3):177-9.
• SL Irons, DE Evans, F Brandizzi The first 238 amino acids of the human lamin B receptor are targeted to the nuclear envelope in plants J Exp Bot. 2003 Mar;54(384):943-50.
• C Hawes, C Saint-Jore, F Brandizzi Endomembrane and cytoskeleton interrelationships in higher plants The Golgi apparatus and the plant secretory pathway 2003:63-75.
• IA Sparkes, F Brandizzi, SP Slocombe, M El-Shami, C Hawes, A Baker DEVELOPMENT AND HORMONE ACTION-An Arabidopsis pex10 Null Mutant Is Embryo Lethal, Implicating Peroxisomes in an Essential Role during Plant Embryogenesis Plant Physiol. 2003 133(4):1809-1819.
• C Hawes, F Brandizzi At the heart of the factory: the plant Golgi Biochem. 2003 25(3):18-21.

Before 2003

• F Brandizzi, M Fricker, C Hawes A greener world: the revolution in plant bioimaging Nat Rev Mol Cell Biol. 2002 Jul;3(7):520-30.
• F Brandizzi, EL Snapp, AG Roberts, J Lippincott-Schwartz, C Hawes Membrane Protein Transport between the Endoplasmic Reticulum and the Golgi in Tobacco Leaves Is Energy Dependent but Cytoskeleton Independent  Plant Cell. 2002 Jun;14(6):1293-309.
• F Brandizzi, N Frangne, S Marc-Martin, C Hawes, JM Neuhaus, N Paris The destination for single-pass membrane proteins is influenced markedly by the length of the hydrophobic domain Plant Cell. 2002 May;14(5):1077-92.
• CM Saint‐Jore, J Evins, H Batoko, F Brandizzi, I Moore, C Hawes Redistribution of membrane proteins between the Golgi apparatus and endoplasmic reticulum in plants is reversible and not dependent on cytoskeletal networks Plant J. 2002 Mar;29(5):661-78.
• K Törmäkangas, JL Hadlington, P Pimpl, S Hillmer, F Brandizzi, TH Teeri, J Denecke A vacuolar sorting domain may also influence the way in which proteins leave the endoplasmic reticulum Plant Cell. 2001 Sep;13(9):2021-32.
• C Hawes, CM Saint-Jore, F Brandizzi, H Zheng, AV Andreeva, P Boevink Cytoplasmic illuminations: in planta targeting of fluorescent proteins to cellular organelles Protoplasma. 2001;215(1-4):77-88.
• CR Hawes, F Brandizzi, AV Andreeva Endomembranes and vesicle trafficking Curr Opin Plant Biol. 1999 Dec;2(6):454-61.
• MG Caiola, F Brandizzi, A Canini Calcium Localization in Pollen of Hermodactylus Tuberosus Mill. (Iridaceae) 1996 Jan;130(1):400